Projects
Our current portfolio includes (but is not limited to) standardized analysis workflows for various NGS applications:
| StoP-CoV |
- Genome wide association analysis (GWAS)
- Genetic variant analysis
- Exome analysis
- Transcriptome analysis
- Structural variation (CNV)
| SCHISDIMA |
- Genome assembly and functional annotation
- Transcriptome analysis
- Pan-genome analysis
- Phylogenetic assessment (MLST / cgMLST / SNP)
- Mobilome
- Bacterial GWAS
- Genetic variant analysis
- Antimicrobial resistance screening (AMR)
- Metagenomic / Microbiome analysis
| AMR Surveillance |
- Genome assembly and functional annotation
- Genetic variant analysis
- Phylogenetic assessment
- SARS Cov 2 assembly, mutation analysis, and lineage assignment
